Rna Seq
Advertisement
MiRPI v.1.0
MicroRNAs (miRNAs) are newly discovered class of non-coding small RNAs of 20-24 nucleotide length that regulate gene and protein expression in plants and animals. MiRNAs have so far been identified mostly by specific cloning of small RNA molecules,
Advertisement
4SALE v.1.5
4SALE is a software for Synchronous RNA Sequence and Secondary Structure Alignment and Editing. 4SALE now integrates lara as a sequence and secondary structure aligment alternative to the 4SALE alignment option. In sequence analysis the multiple
XRNA v.1.1.12
Create RNA secondary structure diagrams fast and easy. XRNA is a Java based suite of tools for the creation, annotation and display of RNA secondary structure diagrams.
AltAnalyze v.2.0.7.1 Development
AltAnalyze is a freely available, cross-platform software designed to assess changes in protein sequence, domain composition, and microRNA targeting from user RNA sequencing (RNASeq) or microarray data. To do this,
RNAstructure v.5.1
RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis.
SeqWord Sniffer v.1.0
SeqWord Sniffer is a Genomic DNA sequence automatic searcher, do an automatic search in genomic DNA sequences for loci enriched with the horizontally transferred elements, fitness genes, giant genes, genes for ribosomal RNA and proteins.
ProfDistS v.0.9.9
ProfDistS analyze RNA secondary structures. Profile Neighbor Joining (PNJ) as implemented in ProfDist is computationally efficient in reconstructing very large trees.
ReverseComplement v.1.8
Analyze DNA or RNA sequence. ReverseComplement is a simple tool for determining the reverse, complement, and reverse complement of DNA and RNA sequences.Requirements: *
RNAfamily v.1.0
View RNA secondary structure with this tool. RNAfamily is a simple program tools that enables to display all secondary structures of a family of RNA molecules. It uses the linear backbone representation. RNAfamily provides usual graphical features:
FASTML v.2.02
FASTML is a software for computing the ancestral amino-acid sequences of a phylogenetic tree.FASTML uses flags in the command line arguments: -For help, type "fastml.exe -h" -s seq.aln = the sequence input file name. -t tree.txt = the input tree file
GPS (Genome Positioning System) v.1.0
Study protein-DNA interaction using ChIP-Seq data. TThe Genome Positioning System (GPS) is a utility tool to study protein-DNA interaction using ChIP-Seq data.